Author: Ragnar Groot Koerkamp
- March 2024 A*PA2: up to 20x faster exact global alignment
- January 2024 Review of refined minimizes
- January 2024 Minimizers and variations
- January 2024 Intro to Rust
- January 2024 Notes on bidirectional anchors
- January 2024 One Billion Row Challenge
- December 2023 Perfect NtHash for Robust Minimizers
- December 2023 A*PA talk @ CWI
- December 2023 Notes on implementing Longest Common Repeat (LCR)
- November 2023 ALPACA/PANGAIA winter workshop notes
- November 2023 Notes on writing course
- October 2023 [WIP] PTRhash: Improving the PTHash Minimal Perfect Hash Function
- October 2023 BAPCtools instruction
- September 2023 PTRHash: Notes on adapting PTHash in Rust
- September 2023 BBHash: some ideas
- September 2023 BitPAl bitpacking algorithm
- August 2023 [WIP] Bitpacking and string searching
- July 2023 Shortest paths, bucket queues, and A* on the edit graph
- July 2023 Research proposal: subquadratic string graph construction
- July 2023 Loukides, Pissis, Thankachan, Zuba :: Suffix-Prefix Queries on a Dictionary