Tag: Highlight

• March 2025 SimdSketch: a fast bucket sketch
  survey sketching highlight
• February 2025 0. Optimal Throughput Bioinformatics
  thesis highlight wip
• February 2025 1. Pairwise Alignment
  thesis survey pairwise-alignment highlight wip
• February 2025 2. Minimizers and More
  thesis survey minimizers highlight
• February 2025 3. High Throughput Bioinformatics
  thesis hpc highlight wip
• February 2025 PtrHash: Minimal Perfect Hashing at RAM Throughput
  paper highlight mphf
• December 2024 Static search trees: 40x faster than binary search
  results walkthrough highlight hpc binary-search
• July 2024 SimdMinimizers: Computing random minimizers, fast
  results walkthrough highlight hpc minimizers nthash
• June 2024 A near-tight lower bound on minimizer density
  results highlight minimizers math
• June 2024 CPU performance
  survey highlight hpc wip
• March 2024 A*PA2: Up to 19x faster exact global alignment
  paper highlight pairwise-alignment astar hpc
• January 2024 Mod-minimizers and other minimizers
  ideas survey lablog highlight minimizers
• January 2024 One Billion Row Challenge
  lablog highlight hpc
• November 2022 String algorithm visualizations
  ideas highlight suffix-array visualization
• May 2021 28000x speedup with Numba.CUDA
  results walkthrough highlight hpc